Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939739.1_cds_XP_016484216.1_75253
CDS Infomation

[gene=LOC107804798] [db_xref=GeneID:107804798] [protein=sister chromatid cohesion 1 protein 3-like] [protein_id=XP_016484216.1] [location=join(36468..36588,37969..38230,38304..38350,38446..38495,38588..38637,38720..39093,39183..39297,39386..39522,39600..40069,40596..40635,40802..40874,40956..41088,41390..41491)] [gbkey=CDS]
Sequence

ATGTTTTATTCGCACACATTCTTGGGACGAAAGGGTCCGTTAGGGACAGTATGGTGCGCA
GCACACTTGCAAAAGTTGAAGAAGCCTCATTATATTTCCACTCACATTCCCTCCACTGTT
GAACGCATCATGTATCCTGATGTACCTATTGCACTGCGAATGTCTGGCCACCTTCTGTTT
GGAGTTGTTCGGATATACTCAAAGCAAGTTGAATACTTTTCCGATGACTGCAAAAACTTA
CAAGCTGTGTTATTTAAGGCCTTTACTTCTTCAAATGTCAATCTGCCGGCAGATGCCACT
CATGCACCATACCACTCCATTACTTTACCAGAAACATTTGAACTTGATGCCTTAGTTTTT
GATGAAGATCTTGACCTGAATAGGTTCGAGGATACTCATCTTAAAAGTTATGAAGAGATA
ACTTTGGAAGATCAAATTCTAACGCGTGAAGATCAGTATATAGCTATTCTCATTGATGAG
GACATAGCAAAGAGTTTGTCAAAATCAGGTGCCATGCCTATGGAGATAGATTCTGAACCT
TCAAATCCAGAAGGAACTGCTGCTCAATCCCTAAATTCTTCCCCTAAGATTCAGTCAGGA
CTAAACAGAGAAACCGTTCGTAATGACATTCCTCAAGATATTCCAGAAATTGAAATCATG
CGTGATGCTGTCCATGATCATAGTTTTGATCATGTTCCCTTGTGGTCAGACCAAGGGAAT
GATGTGATGGAACCAGATAAAATTCTGGAGGAACAGATCATGAGAGAGAAGGAAACTACA
AGCCCAATTGTAGAAGAGATGGGGGCCCCTGAGGGGCATTCTATCCTGTCTCAACAACGG
CAAGAACCACCTTCTGCCACTTCAGTGGAGGCTCACGAATTTGCTGATCCACAAATGTCA
TTTGGGCATCAGTCACCTGATTTAGCACTTCGATCAACACCCCCTCCTGAGATGCCAAAA
GCAAGGGGAAGAAAGCGAAAGCTACTCAAATATGATAAGGAATTAGTATTGTCGAATAAA
AAGATGAGAAGGGATCTAGAAGATACCAGTGATTTAGTACGCCAGAAAAACAATGCTCCA
TTTTCTCGTCTGGACATCTGGAAACAAAACAATAAACTAAGAAACGATGGAATTTTATTT
GAGCCTTTAATAACTGGATTATGTGATGATCTCTGTAATATCTACAAGGAAGACTTCATT
TCAGCAAAAGTCAAGACGGCTTCCCCACAGGATGATTATGCAGAACCCAGCAATAACCAA
TCCTCTCCATCTGGGAATGATCTTCCAGTGGAAATTGAAAGACTGCGTGATAACCAAGAC
TTTGCAAGCACCAATTTGTTGTCTGAAATTTTGCCTTCACCAAATAAGTCCATTTCCTCT
CCACTAATGTCCATGCCTTCTACAAGCAGAAGAGATGATTTCACTCCTGCTACTACAACT
TTTGGGACAGAATCAAGTCAAATGGGAAGAACGATGGAGAGTGAGGTGCTCCCTACGCCC
GACCCAGCAGCATTTACTGGGTATGTTGGTTCTGATATGGAGACCCCTTCAACATGGTAT
GGAGAGGAACTAGGCGTGGAGAATACCGTTCTGTCTGATATTCCTGAGTTTGACAATTCT
GCTGGGGATCTAAGTTTTCTAGAACAAGATGACAACACTCCTATTGGACTTCGAGGAACT
CCCTCGTCAAGTAAGCAAGGGGGAACACCACAGTTTGATACATTATCTGCCAGAACAAGA
GCTGTGGCTCAATATTTGAAGGGGCAGTCACCAGCAACCCCCATCTCAGAAGATACTGGA
GATCTCAGCTTAAATGCAATTTTAGAAGGCAAAAAGAGAACAATATGTGCTCGAATGTTT
TTTGAGACACTGGTGTTGGAGAATTGTGGACTTGTACATGCGAATCAAAATGAACCTTAT
GGTGATATAACTTTGAAAGTGACTTCCAAACTGAAGGACCATTTTTCAAGCTAA

Peptide Sequence

PEP ID

XP_016484216.1
PEP Infomation

PREDICTED: sister chromatid cohesion 1 protein 3-like [Nicotiana tabacum]
Sequence

MFYSHTFLGRKGPLGTVWCAAHLQKLKKPHYISTHIPSTVERIMYPDVPIALRMSGHLLF
GVVRIYSKQVEYFSDDCKNLQAVLFKAFTSSNVNLPADATHAPYHSITLPETFELDALVF
DEDLDLNRFEDTHLKSYEEITLEDQILTREDQYIAILIDEDIAKSLSKSGAMPMEIDSEP
SNPEGTAAQSLNSSPKIQSGLNRETVRNDIPQDIPEIEIMRDAVHDHSFDHVPLWSDQGN
DVMEPDKILEEQIMREKETTSPIVEEMGAPEGHSILSQQRQEPPSATSVEAHEFADPQMS
FGHQSPDLALRSTPPPEMPKARGRKRKLLKYDKELVLSNKKMRRDLEDTSDLVRQKNNAP
FSRLDIWKQNNKLRNDGILFEPLITGLCDDLCNIYKEDFISAKVKTASPQDDYAEPSNNQ
SSPSGNDLPVEIERLRDNQDFASTNLLSEILPSPNKSISSPLMSMPSTSRRDDFTPATTT
FGTESSQMGRTMESEVLPTPDPAAFTGYVGSDMETPSTWYGEELGVENTVLSDIPEFDNS
AGDLSFLEQDDNTPIGLRGTPSSSKQGGTPQFDTLSARTRAVAQYLKGQSPATPISEDTG
DLSLNAILEGKKRTICARMFFETLVLENCGLVHANQNEPYGDITLKVTSKLKDHFSS

Transcript Sequence

Gene sequence data has not been registered.